Sign in
← Back to search
github Active

Repository profile

cafferychen777/ChatSpatial

MCP server for spatial transcriptomics analysis through natural language interfaces.

Python MIT main Stack scanned README.md
Sign in to like cafferychen777/ChatSpatial
Open website Open GitHub
Stars
41
Forks
11
Watchers
1
Issues
13
Commits
958
Awesome lists
1

Repository updates

Follow repository updates

Get generated cafferychen777/ChatSpatial development summaries by email, or follow the weekly and monthly RSS feeds.

Weekly RSS Monthly RSS

Sign in to subscribe by email. RSS feeds are public.

Sign in to subscribe

Activity and growth

Tracked growth, recent movement, and commit velocity from stored repository snapshots.

Latest capture 2026-07-16 03:08

Star growth, last 7 days
0 0.0%
Commit velocity, last 7 days
0 0.0%
Stars since baseline
+3
Snapshot coverage
7

Tracked growth

7 captures since 2026-05-22

Stars from baseline +3

Time horizon

All tracked data

Stars history

Total stars

Commits history

Default branch commits

Detected stack

Frameworks, package managers, ecosystems, and dependency manifests found during catalog scans.

Scanned 2026-07-16 03:08

Stack signals
1
Package managers
2
Manifest files
2
Dependencies
81

Frameworks and tools

  • pytest test framework · high confidence
PEP 517 pip python

Dependency files

2 manifests
  • pyproject.toml python ecosystem, 75 dependencies
  • docs/requirements.txt python ecosystem, 6 dependencies

Classification

Searchable topics, generated tags, and stack labels that explain where this repository fits.

Topics
20
Tags
0
Stacks
1

Topics

#agentic-ai #bioinformatics #cell-communication #claude-desktop #computational-biology #deconvolution #genomics #llm-agent #machine-learning #mcp-server #model-context-protocol #python #pytorch #scanpy #single-cell #spatial-analysis #spatial-domains #spatial-transcriptomics #squidpy #visualization

Generated tags

No generated tags yet.

Stack labels

pytest

AI development signals

Agent instructions and tool configuration paths found in the repository tree.

0 paths
No AI development config files detected.

Similar repositories

Nearest indexed repositories by embedding similarity.

embeddedlayers/mcp-analytics

The statistical analyst in your AI chat — bring data and a question, own a citable, re-runnable analysis. Four depth tiers, from instant Snapshot to full Deck study. Works in Claude, Cursor, and any MCP client.

7 stars
JavaScript 1 awesome list

gaopengbin/cesium-mcp

AI-powered CesiumJS 3D globe control 49 tools for camera, entities, layers, animation & spatial analysis via Model Context Protocol (MCP). Natural language to 3D GIS.

115 stars
JavaScript 1 awesome list

chanzuckerberg/cellxgene

An interactive explorer for single-cell transcriptomics data

780 stars
JavaScript 1 awesome list

blazickjp/arxiv-mcp-server

A Model Context Protocol server for searching and analyzing arXiv papers

2,962 stars
Python 1 awesome list

cablate/mcp-google-map

A powerful Model Context Protocol (MCP) server providing comprehensive Google Maps API integration with LLM processing capabilities.

390 stars
TypeScript 1 awesome list

Metadata

Language
Python
License
MIT
Default branch
main
Created
2025-05-06
First commit
2025-05-06
Last pushed
2026-07-16
GitHub updated
2026-07-16
Last synced
2026-07-16 03:08
Stack detected
2026-07-16 03:08
Archived
no

Links and files

GitHub Website

https://docs.cafferyang.com/

README

Appears in

1